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A more recent version of this article appeared on October 1, 2008.
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Submitted on June 13, 2008
Revised on July 22, 2008
Accepted on July 29, 2008

Antibodypedia – a portal for sharing antibody and antigen validation data

Erik Björling and Mathias Uhlen

Royal Institute of Technology (KTH), Stockholm 10691

Corresponding Author: mathias{at}biotech.kth.se

Antibodies are useful tools to characterize the components of the human proteome and to validate potential protein biomarkers discovered through various clinical proteomics efforts. The lack of validation results across various applications for most antibodies often makes it necessary to perform cumbersome investigations to ensure specificity of a particular antibody in a certain application. A need therefore exists for a standardized system for sharing validation data about publicly available antibodies and to allow antibody providers as well as users to contribute and edit experimental evidence data, including data also on the antigen. Here, we describe a new publicly available portal called Antibodypedia (http://www.antibodypedia.org), which has been developed to allow sharing of information regarding validation of antibodies in which providers can submit their own validation results and reliability scores. We report standardized validation criteria and submission rules for applications such as Western blots, protein arrays, immunohistochemistry and immunofluorescence. The contributor is expected to provide experimental evidence and a validation score for each antibody and the users can subsequently provide feedback and comments on the use of the antibody. The database thus provides a virtual resource of publicly available antibodies towards human proteins with accompanying experimental evidence supporting an individual validation score for each antibody in an application-specific manner.


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